AI 辅助科研论文写作¶

Prompt 示例：
"Please polish the following abstract for submission to [journal name].
Keep it within 250 words. Maintain the structure:
Background → Objective → Methods → Results → Conclusion.
Here is my draft:
[粘贴你的初稿]"

Prompt 示例：
"I'm writing the introduction for a paper about [你的研究主题].
The logical flow should be:
1. [大背景]
2. [目前的知识/已有研究]
3. [知识空白/尚未解决的问题]
4. [本研究的目的和意义]
Please help me create a detailed outline with transition sentences."

Prompt 示例：
"Convert the following methods section to formal academic English.
Use passive voice. Ensure all software versions, parameters, and
thresholds are clearly stated:
[粘贴你的方法描述]"

Prompt 示例：
"Rewrite the following results paragraph to be more concise and objective.
Remove any interpretive statements. Keep only factual findings:
[粘贴你的结果段落]"

Prompt 示例：
"Expand the following discussion points into well-structured paragraphs.
For each point, provide a topic sentence, supporting argument, and
transition to the next paragraph:
1. Our finding that [X] is consistent with [文献A]
2. However, unlike [文献B], we observed [Y]
3. A possible explanation is [Z]
4. Limitations of this study include...
5. Future research should..."

Role: You are an academic English editor specializing in [生物信息学/微生物组学].
Task: Polish the following paragraph for a peer-reviewed journal.
Requirements:
- Fix grammar and spelling errors
- Improve sentence fluency and clarity
- Maintain the original meaning and technical accuracy
- Use formal academic tone
- Do NOT add new content or change scientific claims

Text to polish:
[粘贴你的文本]

Rewrite the following paragraph using different sentence structures
and vocabulary while preserving the exact scientific meaning.
The rewrite should be suitable for an academic journal.
Do NOT change any data, statistics, or technical terms.

Original:
[粘贴原文]

Translate the following Chinese academic text into formal English
suitable for a peer-reviewed journal in the field of [bioinformatics].
Requirements:
- Use standard academic terminology
- Convert to passive voice where appropriate
- Keep all gene names, software names, and abbreviations unchanged
- Maintain the logical flow of the original

Chinese text:
[粘贴中文文本]

I received a reviewer comment on my manuscript. Help me draft a
professional and constructive response.

Reviewer's comment:
"[粘贴审稿人意见]"

What we did to address it:
[简述你做了什么修改]

Please write a polite, point-by-point response that:
1. Thanks the reviewer for the suggestion
2. Explains what changes were made
3. References the specific location in the revised manuscript

Summarize the following research paper content into a structured
abstract with exactly these sections:
- Background (1-2 sentences)
- Objective (1 sentence)
- Methods (2-3 sentences)
- Results (2-3 sentences)
- Conclusion (1-2 sentences)

Total word count: 200-250 words.
Field: [bioinformatics/metagenomics]

Content to summarize:
[粘贴论文核心内容]

% 文档类：article 是最常用的论文类型
\documentclass[12pt,a4paper]{article}

% 导入常用包
\usepackage[utf8]{inputenc}       % UTF-8 编码支持
\usepackage{amsmath}               % 数学公式增强
\usepackage{graphicx}              % 插入图片
\usepackage{booktabs}              % 漂亮的表格线
\usepackage{hyperref}              % 超链接支持
\usepackage[numbers]{natbib}       % 参考文献管理

% 文档标题信息
\title{Your Paper Title Here}
\author{Wenqiang Peng}
\date{\today}

% 正文开始
\begin{document}

\maketitle                         % 生成标题
\begin{abstract}
Your abstract text here.
\end{abstract}

\section{Introduction}             % 一级标题：引言
\section{Methods}                  % 一级标题：方法
\subsection{Data Collection}       % 二级标题：数据采集
\section{Results}                  % 一级标题：结果
\section{Discussion}               % 一级标题：讨论

\bibliographystyle{plainnat}       % 参考文献格式
\bibliography{references}          % 引用 references.bib 文件

\end{document}

% 行内公式（用 $ 包围）
Shannon 多样性指数 $H' = -\sum_{i=1}^{S} p_i \ln p_i$

% 独立公式（用 equation 环境）
\begin{equation}
  \text{AUC} = \int_0^1 \text{TPR}(t) \, d\text{FPR}(t)
\end{equation}

% 多行公式对齐（用 align 环境）
\begin{align}
  \text{Precision} &= \frac{TP}{TP + FP} \\    % 精确率
  \text{Recall}    &= \frac{TP}{TP + FN} \\    % 召回率
  F_1              &= 2 \cdot \frac{P \cdot R}{P + R}  % F1 分数
\end{align}

\begin{figure}[htbp]              % h=当前位置 t=页顶 b=页底 p=单独一页
  \centering                       % 居中
  \includegraphics[width=0.8\textwidth]{figures/heatmap.pdf}  % 图片路径+宽度
  \caption{Heatmap of differential abundance analysis.}       % 图注
  \label{fig:heatmap}             % 标签，用于交叉引用
\end{figure}

% 在正文中引用：As shown in Figure~\ref{fig:heatmap}...

\begin{table}[htbp]
  \centering
  \caption{Performance comparison of classification models.}
  \label{tab:performance}
  \begin{tabular}{lccc}           % l=左对齐 c=居中 共4列
    \toprule                       % 顶部粗线（需要 booktabs 包）
    Model & Accuracy & AUC & F1-score \\
    \midrule                       % 中间线
    Random Forest  & 0.85 & 0.91 & 0.83 \\
    SVM            & 0.82 & 0.88 & 0.80 \\
    XGBoost        & 0.87 & 0.93 & 0.86 \\
    \bottomrule                    % 底部粗线
  \end{tabular}
\end{table}

% 期刊文章
@article{qin2012metagenome,
  title     = {A metagenome-wide association study of gut microbiota in type 2 diabetes},
  author    = {Qin, Junjie and Li, Yingrui and Cai, Zhiming and others},
  journal   = {Nature},
  volume    = {490},
  number    = {7418},
  pages     = {55--60},
  year      = {2012},
  publisher = {Nature Publishing Group}
}

% 软件工具
@article{bolger2014trimmomatic,
  title     = {Trimmomatic: a flexible trimmer for Illumina sequence data},
  author    = {Bolger, Anthony M and Lohse, Marc and Usadel, Bjoern},
  journal   = {Bioinformatics},
  volume    = {30},
  number    = {15},
  pages     = {2114--2120},
  year      = {2014}
}

"During the preparation of this manuscript, the authors used
[ChatGPT/Claude/Grammarly] for [language polishing/grammar checking].
The authors reviewed and edited all AI-generated suggestions and take
full responsibility for the content of this publication."

第一步：构思+中文初稿
  └→ 自己动脑，列大纲，写中文要点

第二步：翻译
  └→ Claude/ChatGPT 翻译成英文初稿

第三步：结构优化
  └→ AI 帮助理顺段落逻辑、补充过渡句

第四步：学术润色
  └→ Paperpal / Writefull / Grammarly

第五步：查重+AI 检测
  └→ Turnitin 查重 + 手动检查 AI 痕迹

第六步：人工终审
  └→ 逐句检查专业术语、数据准确性、引用正确性

第七步：声明 AI 使用
  └→ 在 Acknowledgements 中如实声明